Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ddx4 (DEAD-box helicase 4) Rattus norvegicus
Analyze
Symbol: Ddx4
Name: DEAD-box helicase 4
Description: Predicted to have RNA binding activity and RNA helicase activity. Involved in spermatogenesis. Localizes to the chromatoid body and perinuclear region of cytoplasm. Orthologous to human DDX4 (DEAD-box helicase 4); INTERACTS WITH 17alpha-ethynylestradiol; 3-chloropropane-1,2-diol; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4; DEAD box protein 4; LOC310090; probable ATP-dependent RNA helicase DDX4; putative ATP-dependent RNA helicase DDX4; RVLG; vasa homolog; vasa-like gene protein
Orthologs:
Homo sapiens (human) : DDX4 (DEAD-box helicase 4)  HGNC  Alliance
Mus musculus (house mouse) : Ddx4 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx4 (DEAD-box helicase 4)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX4 (DEAD-box helicase 4)
Canis lupus familiaris (dog) : DDX4 (DEAD-box helicase 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx4 (DEAD-box helicase 4)
Sus scrofa (pig) : DDX4 (DEAD-box helicase 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0244,447,610 - 44,504,263 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0263,489,384 - 63,545,657 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4243,964,552 - 44,022,919 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1243,783,992 - 43,955,157 (-)NCBI
Celera240,006,460 - 40,062,288 (-)NCBICelera
Cytogenetic Map2q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ddx4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308793
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-18
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.