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Gene: Ttc21a (tetratricopeptide repeat domain 21A) Rattus norvegicus
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Symbol: Ttc21a
Name: tetratricopeptide repeat domain 21A
Description: Predicted to be involved in intraciliary retrograde transport and protein localization to cilium. Predicted to localize to the intraciliary transport particle A. Orthologous to human TTC21A (tetratricopeptide repeat domain 21A); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC301065; RGD1308806; similar to TPR domain containing STI2; tetratricopeptide repeat domain 21A, pseudogene 1; tetratricopeptide repeat protein 21A; Ttc21a-ps1
Orthologs:
Homo sapiens (human) : TTC21A (tetratricopeptide repeat domain 21A)  HGNC  Alliance
Mus musculus (house mouse) : Ttc21a (tetratricopeptide repeat domain 21A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ttc21a (tetratricopeptide repeat domain 21A)
Pan paniscus (bonobo/pygmy chimpanzee) : TTC21A (tetratricopeptide repeat domain 21A)
Canis lupus familiaris (dog) : TTC21A (tetratricopeptide repeat domain 21A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ttc21a (tetratricopeptide repeat domain 21A)
Sus scrofa (pig) : TTC21A (tetratricopeptide repeat domain 21A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08128,622,414 - 128,657,199 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08127,824,105 - 127,858,427 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48124,895,329 - 124,929,673 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18124,916,314 - 124,949,410 (+)NCBI
Celera8118,813,990 - 118,848,613 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ttc21a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308806
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.