Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ogfod1 (2-oxoglutarate and iron-dependent oxygenase domain containing 1) Rattus norvegicus
Analyze
Symbol: Ogfod1
Name: 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Description: Predicted to have peptidyl-proline 3-dioxygenase activity. Predicted to be involved in several processes, including cell population proliferation; regulation of translational termination; and stress granule assembly. Predicted to localize to the cytoplasmic stress granule; cytosol; and nucleus. Orthologous to human OGFOD1 (2-oxoglutarate and iron dependent oxygenase domain containing 1); INTERACTS WITH (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1; LOC307657; prolyl 3-hydroxylase OGFOD1; RGD1308848; similar to mKIAA1612 protein
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01911,425,301 - 11,451,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01911,399,734 - 11,425,518 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41911,382,885 - 11,412,512 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11911,391,459 - 11,417,244 (-)NCBI
Celera1910,833,456 - 10,859,240 (-)NCBICelera
Cytogenetic Map19p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ogfod1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308848
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.