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Gene: Trnt1 (tRNA nucleotidyl transferase 1) Rattus norvegicus
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Symbol: Trnt1
Name: tRNA nucleotidyl transferase 1
Description: Predicted to have ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity and tRNA binding activity. Predicted to be involved in mitochondrial tRNA 3'-end processing and tRNA 3'-terminal CCA addition. Predicted to localize to the mitochondrion. Human ortholog(s) of this gene implicated in sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay. Orthologous to human TRNT1 (tRNA nucleotidyl transferase 1); PARTICIPATES IN RNA transport pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; finasteride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CCA tRNA nucleotidyltransferase 1, mitochondrial; LOC312616; MGC124985; tRNA nucleotidyl transferase, CCA-adding, 1; tRNA-nucleotidyltransferase 1, mitochondrial
Orthologs:
Homo sapiens (human) : TRNT1 (tRNA nucleotidyl transferase 1)  HGNC  Alliance
Mus musculus (house mouse) : Trnt1 (tRNA nucleotidyl transferase, CCA-adding, 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trnt1 (tRNA nucleotidyl transferase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TRNT1 (tRNA nucleotidyl transferase 1)
Canis lupus familiaris (dog) : TRNT1 (tRNA nucleotidyl transferase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trnt1 (tRNA nucleotidyl transferase 1)
Sus scrofa (pig) : TRNT1 (tRNA nucleotidyl transferase 1)
more info ...
Related Pseudogenes: Trnt1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04138,855,497 - 138,869,217 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04203,326,023 - 203,339,605 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44142,124,815 - 142,138,391 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4128,402,461 - 128,415,956 (+)NCBICelera
Cytogenetic Map4q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trnt1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308857
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.