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Gene: Slitrk1 (SLIT and NTRK-like family, member 1) Rattus norvegicus
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Symbol: Slitrk1
Name: SLIT and NTRK-like family, member 1
Description: Involved in regulation of synapse organization. Localizes to the GABA-ergic synapse; glutamatergic synapse; and integral component of postsynaptic density membrane. Human ortholog(s) of this gene implicated in Gilles de la Tourette syndrome and trichotillomania. Orthologous to human SLITRK1 (SLIT and NTRK like family member 1); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC306147; SLIT and NTRK-like protein 1
Orthologs:
Homo sapiens (human) : SLITRK1 (SLIT and NTRK like family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slitrk1 (SLIT and NTRK-like family, member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slitrk1 (SLIT and NTRK like family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLITRK1 (SLIT and NTRK like family member 1)
Canis lupus familiaris (dog) : SLITRK1 (SLIT and NTRK like family member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slitrk1 (SLIT and NTRK like family member 1)
Sus scrofa (pig) : SLITRK1 (SLIT and NTRK like family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01593,303,382 - 93,307,420 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01596,793,133 - 96,797,171 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41593,205,850 - 93,209,888 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11593,220,490 - 93,225,771 (-)NCBI
Celera1584,748,071 - 84,752,109 (-)NCBICelera
Cytogenetic Map15q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slitrk1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308858
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.