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Gene: Col19a1 (collagen type XIX alpha 1 chain) Rattus norvegicus
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Symbol: Col19a1
Name: collagen type XIX alpha 1 chain
Description: Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization and skeletal muscle tissue development. Predicted to localize to the extracellular matrix and extracellular space. Orthologous to human COL19A1 (collagen type XIX alpha 1 chain); INTERACTS WITH acrylamide; bisphenol A; lead diacetate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(XIX) chain; collagen, type XIX, alpha 1; LOC367236; LOW QUALITY PROTEIN: collagen alpha-1(XIX) chain; procollagen, type XIX, alpha 1
Orthologs:
Homo sapiens (human) : COL19A1 (collagen type XIX alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col19a1 (collagen, type XIX, alpha 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col19a1 (collagen type XIX alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL19A1 (collagen type XIX alpha 1 chain)
Canis lupus familiaris (dog) : COL19A1 (collagen type XIX alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col19a1 (collagen type XIX alpha 1 chain)
Sus scrofa (pig) : COL19A1 (collagen type XIX alpha 1 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0930,508,003 - 30,864,836 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0929,332,121 - 29,688,495 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4923,003,618 - 23,337,800 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1923,005,031 - 23,339,214 (-)NCBI
Celera924,210,032 - 24,556,238 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Col19a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308920
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.