Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tnpo3 (transportin 3) Rattus norvegicus
Analyze
Symbol: Tnpo3
Name: transportin 3
Description: Predicted to have Ran GTPase binding activity and identical protein binding activity. Predicted to be involved in protein import into nucleus. Predicted to localize to annulate lamellae; cytoplasm; and nuclear envelope. Human ortholog(s) of this gene implicated in autosomal dominant limb-girdle muscular dystrophy type 2. Orthologous to human TNPO3 (transportin 3); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol 3-benzoate; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296954; transportin-3
Orthologs:
Homo sapiens (human) : TNPO3 (transportin 3)  HGNC  Alliance
Mus musculus (house mouse) : Tnpo3 (transportin 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnpo3 (transportin 3)
Pan paniscus (bonobo/pygmy chimpanzee) : TNPO3 (transportin 3)
Canis lupus familiaris (dog) : TNPO3 (transportin 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnpo3 (transportin 3)
Sus scrofa (pig) : TNPO3 (transportin 3)
Chlorocebus sabaeus (African green monkey) : TNPO3 (transportin 3)
Heterocephalus glaber (naked mole-rat) : Tnpo3 (transportin 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0456,820,023 - 56,897,310 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl456,820,023 - 56,897,338 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0456,587,184 - 56,664,471 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4456,422,446 - 56,499,733 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1456,682,348 - 56,760,325 (-)NCBI
Celera453,250,776 - 53,328,057 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tnpo3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308938
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.