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Gene: Vat1 (vesicle amine transport 1) Rattus norvegicus
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Symbol: Vat1
Name: vesicle amine transport 1
Description: Predicted to have oxidoreductase activity and zinc ion binding activity. Predicted to be involved in negative regulation of mitochondrial fusion. Localizes to the mitochondrial outer membrane. Orthologous to human VAT1 (vesicle amine transport 1); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287721; MGC124668; mitofusin-binding protein; synaptic vesicle membrane protein VAT-1 homolog; vesicle amine transport protein 1 homolog (T californica)
Orthologs:
Homo sapiens (human) : VAT1 (vesicle amine transport 1)  HGNC  Alliance
Mus musculus (house mouse) : Vat1 (vesicle amine transport 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vat1 (vesicle amine transport 1)
Pan paniscus (bonobo/pygmy chimpanzee) : VAT1 (vesicle amine transport 1)
Canis lupus familiaris (dog) : VAT1 (vesicle amine transport 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vat1 (vesicle amine transport 1)
Sus scrofa (pig) : VAT1 (vesicle amine transport 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01089,366,898 - 89,374,516 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1089,366,899 - 89,374,516 (-)Ensembl
Rnor_5.01089,164,914 - 89,172,532 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41090,483,845 - 90,491,463 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11090,498,214 - 90,505,897 (-)NCBI
Celera1085,107,032 - 85,118,579 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vat1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308943
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.