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Gene: Hm13 (histocompatibility minor 13) Rattus norvegicus
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Symbol: Hm13
Name: histocompatibility minor 13
Description: Predicted to have aspartic endopeptidase activity, intramembrane cleaving; protein homodimerization activity; and ubiquitin protein ligase binding activity. Predicted to be involved in membrane protein proteolysis involved in retrograde protein transport, ER to cytosol and signal peptide processing. Predicted to localize to the cell surface and endoplasmic reticulum. Orthologous to human HM13 (histocompatibility minor 13); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H13; histocompatibility 13; LOC311545; minor histocompatibility antigen H13
Orthologs:
Homo sapiens (human) : HM13 (histocompatibility minor 13)  HGNC  Alliance
Mus musculus (house mouse) : H13 (histocompatibility 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hm13 (histocompatibility minor 13)
Pan paniscus (bonobo/pygmy chimpanzee) : HM13 (histocompatibility minor 13)
Canis lupus familiaris (dog) : HM13 (histocompatibility minor 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hm13 (histocompatibility minor 13)
Sus scrofa (pig) : HM13 (histocompatibility minor 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03148,150,695 - 148,189,623 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03154,555,170 - 154,594,098 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43143,020,648 - 143,059,566 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13142,892,504 - 142,961,304 (+)NCBI
Celera3139,895,459 - 139,934,248 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hm13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308946
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.