Gene: Prg4 (proteoglycan 4) Rattus norvegicus
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Symbol: Prg4
Name: proteoglycan 4
Description: Predicted to have polysaccharide binding activity and scavenger receptor activity; predicted to be involved in hematopoietic stem cell proliferation, negative regulation of interleukin-6 biosynthetic process, and regulation of cell population proliferation; predicted to localize to the extracellular space; orthologous to human PRG4 (proteoglycan 4); INTERACTS WITH (RS)-amphetamine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC289104; lubricin; proteoglycan 4, (megakaryocyte stimulating factor, articular superficial zone protein, camptodactyly, arthropathy, coxa vara, pericarditis syndrome)
Orthologs:
Homo sapiens (human) : PRG4 (proteoglycan 4)  HGNC  Alliance
Mus musculus (house mouse) : Prg4 (proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prg4 (proteoglycan 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PRG4 (proteoglycan 4)
Canis lupus familiaris (dog) : PRG4 (proteoglycan 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prg4 (proteoglycan 4)
Sus scrofa (pig) : PRG4 (proteoglycan 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01367,672,588 - 67,688,902 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01372,637,409 - 72,653,723 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41364,753,316 - 64,769,533 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11364,767,685 - 64,783,195 (-)NCBI
Celera1362,446,883 - 62,463,361 (-)NCBICelera
Cytogenetic Map13q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prg4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308976
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.