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Gene: Abca6 (ATP binding cassette subfamily A member 6) Rattus norvegicus
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Symbol: Abca6
Name: ATP binding cassette subfamily A member 6
Description: Predicted to have ATPase-coupled transmembrane transporter activity and lipid transporter activity. Predicted to be involved in lipid transport. Predicted to localize to the nucleoplasm. Orthologous to human ABCA6 (ATP binding cassette subfamily A member 6); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ATP-binding cassette sub-family A member 6; ATP-binding cassette, sub-family A (ABC1), member 6; ATP-binding cassette, subfamily A (ABC1), member 6; LOC303639
Orthologs:
Homo sapiens (human) : ABCA6 (ATP binding cassette subfamily A member 6)  HGNC  Alliance
Mus musculus (house mouse) : Abca6 (ATP-binding cassette, sub-family A (ABC1), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abca6 (ATP binding cassette subfamily A member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : ABCA6 (ATP binding cassette subfamily A member 6)
Canis lupus familiaris (dog) : ABCA6 (ATP binding cassette subfamily A member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abca6 (ATP binding cassette subfamily A member 6)
Sus scrofa (pig) : ABCA6 (ATP binding cassette subfamily A member 6)
Chlorocebus sabaeus (African green monkey) : ABCA6 (ATP binding cassette subfamily A member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01098,477,716 - 98,546,699 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1098,478,067 - 98,544,447 (-)Ensembl
Rnor_5.01098,184,908 - 98,253,813 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41099,626,334 - 99,693,870 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11099,646,914 - 99,727,703 (-)NCBI
Celera1093,792,868 - 93,862,869 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Abca6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308998
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.