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Gene: Snrnp48 (small nuclear ribonucleoprotein U11/U12 subunit 48) Rattus norvegicus
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Symbol: Snrnp48
Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Description: Predicted to localize to the U12-type spliceosomal complex; cytosol; and nucleoplasm. Orthologous to human SNRNP48 (small nuclear ribonucleoprotein U11/U12 subunit 48); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291060; RGD1309020; similar to RIKEN cDNA 6530403A03; small nuclear ribonucleoprotein 48 (U11/U12); small nuclear ribonucleoprotein 48k (U11/U12); U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01727,243,732 - 27,279,271 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01729,158,965 - 29,194,327 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41732,820,173 - 32,840,752 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11732,823,012 - 32,843,576 (-)NCBI
Celera1726,230,361 - 26,250,165 (-)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Snrnp48
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309020
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.