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Gene: Rpap2 (RNA polymerase II associated protein 2) Rattus norvegicus
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Symbol: Rpap2
Name: RNA polymerase II associated protein 2
Description: Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain and snRNA transcription. Predicted to localize to the RNA polymerase II, holoenzyme; cytosol; and nucleolus. Orthologous to human RPAP2 (RNA polymerase II associated protein 2); PARTICIPATES IN RNA polymerase II transcription pathway; INTERACTS WITH bisphenol A; glafenine; oxaliplatin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305120; putative RNA polymerase II-associated protein 2; RGD1309034; RNA polymerase II subunit B1 CTD phosphatase Rpap2; RNA polymerase II-associated protein 2; similar to Expressed sequence AW060207
Orthologs:
Homo sapiens (human) : RPAP2 (RNA polymerase II associated protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Rpap2 (RNA polymerase II associated protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpap2 (RNA polymerase II associated protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : RPAP2 (RNA polymerase II associated protein 2)
Canis lupus familiaris (dog) : RPAP2 (RNA polymerase II associated protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpap2 (RNA polymerase II associated protein 2)
Sus scrofa (pig) : RPAP2 (RNA polymerase II associated protein 2)
Chlorocebus sabaeus (African green monkey) : RPAP2 (RNA polymerase II associated protein 2)
Heterocephalus glaber (naked mole-rat) : Rpap2 (RNA polymerase II associated protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0143,125,595 - 3,204,590 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl143,124,622 - 3,204,588 (-)Ensembl
Rnor_5.0143,126,061 - 3,205,485 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,664,860 - 2,744,461 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1142,664,860 - 2,744,461 (-)NCBI
Celera142,127,947 - 2,207,709 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rpap2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309034
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.