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Gene: Sh3tc2 (SH3 domain and tetratricopeptide repeats 2) Rattus norvegicus
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Symbol: Sh3tc2
Name: SH3 domain and tetratricopeptide repeats 2
CRRD ID: 1309038
Description: Predicted to be involved in peripheral nervous system myelin maintenance; regulation of ERBB signaling pathway; and regulation of intracellular protein transport. Predicted to localize to plasma membrane and recycling endosome. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 4C. Orthologous to human SH3TC2 (SH3 domain and tetratricopeptide repeats 2); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC102556165; LOC307393; RGD1309038; SH3 domain and tetratricopeptide repeat-containing protein 2; SH3 domain and tetratricopeptide repeats-containing protein 2; similar to RIKEN cDNA D430044G18; uncharacterized LOC102556165
Orthologs:
Homo sapiens (human) : SH3TC2 (SH3 domain and tetratricopeptide repeats 2)  HGNC  Alliance
Mus musculus (house mouse) : Sh3tc2 (SH3 domain and tetratricopeptide repeats 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sh3tc2 (SH3 domain and tetratricopeptide repeats 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SH3TC2 (SH3 domain and tetratricopeptide repeats 2)
Canis lupus familiaris (dog) : SH3TC2 (SH3 domain and tetratricopeptide repeats 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sh3tc2 (SH3 domain and tetratricopeptide repeats 2)
Sus scrofa (pig) : SH3TC2 (SH3 domain and tetratricopeptide repeats 2)
Chlorocebus sabaeus (African green monkey) : SH3TC2 (SH3 domain and tetratricopeptide repeats 2)
Heterocephalus glaber (naked mole-rat) : Sh3tc2 (SH3 domain and tetratricopeptide repeats 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01857,286,266 - 57,403,926 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1857,286,322 - 57,347,577 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01856,514,111 - 56,575,127 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,941,970 - 58,002,846 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11857,990,670 - 58,074,424 (+)NCBI
Celera1853,565,072 - 53,680,040 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sh3tc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309038
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.