Gene: Ptch2 (patched 2) Rattus norvegicus
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Symbol: Ptch2
Name: patched 2
Description: Predicted to have hedgehog family protein binding activity, hedgehog receptor activity, and smoothened binding activity; predicted to be involved in several processes, including cell fate determination, epidermal cell fate specification, and hair cycle; predicted to localize to the plasma membrane; orthologous to human PTCH2 (patched 2); INTERACTS WITH bisphenol A; C60 fullerene; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC366452; patched homolog 1; patched homolog 2; patched homolog 2 (Drosophila); Ptch1
Orthologs:
Homo sapiens (human) : PTCH2 (patched 2)  HGNC  Alliance
Mus musculus (house mouse) : Ptch2 (patched 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptch2 (patched 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PTCH2 (patched 2)
Canis lupus familiaris (dog) : PTCH2 (patched 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptch2 (patched 2)
Sus scrofa (pig) : PTCH2 (patched 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05135,962,252 - 135,983,816 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05139,757,425 - 139,776,623 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,408,481 - 137,429,633 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15137,410,236 - 137,433,563 (+)NCBI
Celera5129,093,838 - 129,114,695 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ptch2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309039
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.