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Gene: Slc9c1 (solute carrier family 9 member C1) Rattus norvegicus
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Symbol: Slc9c1
Name: solute carrier family 9 member C1
Description: Predicted to have solute:proton antiporter activity. Predicted to be involved in flagellated sperm motility. Predicted to localize to the motile cilium. Orthologous to human SLC9C1 (solute carrier family 9 member C1); INTERACTS WITH aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: gene model 610, (NCBI); Gm610; LOC288117; Slc9a10; sodium/hydrogen exchanger 10; solute carrier family 9, member 10; solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1; sperm-specific sodium proton exchanger
Orthologs:
Homo sapiens (human) : SLC9C1 (solute carrier family 9 member C1)  HGNC  Alliance
Mus musculus (house mouse) : Slc9c1 (solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc9c1 (solute carrier family 9 member C1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC9C1 (solute carrier family 9 member C1)
Canis lupus familiaris (dog) : SLC9C1 (solute carrier family 9 member C1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc9c1 (solute carrier family 9 member C1)
Sus scrofa (pig) : SLC9C1 (solute carrier family 9 member C1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01160,184,953 - 60,251,458 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01164,285,570 - 64,350,871 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41156,702,554 - 56,769,394 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11156,760,142 - 56,826,983 (-)NCBI
Celera1154,735,652 - 54,802,154 (-)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc9c1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309075
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.