Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Trappc8 (trafficking protein particle complex 8) Rattus norvegicus
Analyze
Symbol: Trappc8
Name: trafficking protein particle complex 8
Description: Predicted to be involved in several processes, including autophagy of peroxisome; protein localization by the Cvt pathway; and protein localization to phagophore assembly site. Predicted to localize to the TRAPPIII protein complex; cytoplasmic vesicle; and phagophore assembly site. Orthologous to human TRAPPC8 (trafficking protein particle complex 8); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC291750; LOC102554177; LOC291750; RGD1309102; similar to TRS85 homolog; trafficking protein particle complex subunit 8-like
Orthologs:
Homo sapiens (human) : TRAPPC8 (trafficking protein particle complex 8)  HGNC  Alliance
Mus musculus (house mouse) : Trappc8 (trafficking protein particle complex 8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trappc8 (trafficking protein particle complex 8)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAPPC8 (trafficking protein particle complex 8)
Canis lupus familiaris (dog) : TRAPPC8 (trafficking protein particle complex 8)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trappc8 (trafficking protein particle complex 8)
Sus scrofa (pig) : TRAPPC8 (trafficking protein particle complex 8)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01815,298,673 - 15,375,034 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01815,077,693 - 15,154,047 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,576,139 - 12,652,361 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11812,602,781 - 12,685,582 (-)NCBI
Celera1812,104,569 - 12,180,967 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trappc8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309102
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.