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Gene: Nlrc5 (NLR family, CARD domain containing 5) Rattus norvegicus
Symbol: Nlrc5
Name: NLR family, CARD domain containing 5
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including defense response to other organism; regulation of cytokine-mediated signaling pathway; and regulation of macromolecule biosynthetic process. Predicted to localize to centrosome; cytosol; and nucleus. Orthologous to human NLRC5 (NLR family CARD domain containing 5); INTERACTS WITH bisphenol A; DDT; triphenyl phosphate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: copine II; Cpne2; LOC291861; LOW QUALITY PROTEIN: protein NLRC5
Homo sapiens (human) : NLRC5 (NLR family CARD domain containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Nlrc5 (NLR family, CARD domain containing 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nlrc5 (NLR family CARD domain containing 5)
Pan paniscus (bonobo/pygmy chimpanzee) : NLRC5 (NLR family CARD domain containing 5)
Canis lupus familiaris (dog) : NLRC5 (NLR family CARD domain containing 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nlrc5 (NLR family CARD domain containing 5)
Sus scrofa (pig) : NLRC5 (NLR family CARD domain containing 5)
Chlorocebus sabaeus (African green monkey) : NLRC5 (NLR family CARD domain containing 5)
Heterocephalus glaber (naked mole-rat) : Nlrc5 (NLR family CARD domain containing 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01910,904,381 - 11,006,202 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,905,542 - 10,976,396 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,896,530 - 10,916,728 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01910,932,869 - 10,967,808 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,918,833 - 10,966,224 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11910,882,205 - 10,970,980 (-)NCBI
Celera1910,365,727 - 10,449,817 (-)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Nlrc5
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309166
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.