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Gene: Msh4 (mutS homolog 4) Rattus norvegicus
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Symbol: Msh4
Name: mutS homolog 4
Description: Predicted to have DNA-dependent ATPase activity. Predicted to be involved in gamete generation; meiosis I; and ovarian follicle development. Predicted to localize to recombination nodule and synaptonemal complex. Orthologous to human MSH4 (mutS homolog 4); INTERACTS WITH bisphenol A; 17beta-estradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC295541; mutS homolog 4 (E. coli); mutS protein homolog 4
Orthologs:
Homo sapiens (human) : MSH4 (mutS homolog 4)  HGNC  Alliance
Mus musculus (house mouse) : Msh4 (mutS homolog 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Msh4 (mutS homolog 4)
Pan paniscus (bonobo/pygmy chimpanzee) : MSH4 (mutS homolog 4)
Canis lupus familiaris (dog) : MSH4 (mutS homolog 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Msh4 (mutS homolog 4)
Sus scrofa (pig) : MSH4 (mutS homolog 4)
Chlorocebus sabaeus (African green monkey) : MSH4 (mutS homolog 4)
Heterocephalus glaber (naked mole-rat) : Msh4 (mutS homolog 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02260,057,708 - 260,108,897 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,057,855 - 260,108,897 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02278,716,760 - 278,773,060 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42251,801,090 - 251,851,133 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12251,815,109 - 251,866,523 (-)NCBI
Celera2234,728,057 - 234,775,779 (-)NCBICelera
Cytogenetic Map2q45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Msh4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309190
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.