Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Phc1 (polyhomeotic homolog 1) Rattus norvegicus
Analyze
Symbol: Phc1
Name: polyhomeotic homolog 1
Description: Predicted to have chromatin binding activity. Predicted to be involved in cellular response to leukemia inhibitory factor; cellular response to retinoic acid; and histone ubiquitination. Predicted to localize to the PRC1 complex; nuclear body; and sex chromatin. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 11. Orthologous to human PHC1 (polyhomeotic homolog 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC312690; polyhomeotic homolog 1 (Drosophila); polyhomeotic-like 1; polyhomeotic-like 1 (Drosophila); polyhomeotic-like protein 1
Orthologs:
Homo sapiens (human) : PHC1 (polyhomeotic homolog 1)  HGNC  Alliance
Mus musculus (house mouse) : Phc1 (polyhomeotic 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phc1 (polyhomeotic homolog 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PHC1 (polyhomeotic homolog 1)
Canis lupus familiaris (dog) : PHC1 (polyhomeotic homolog 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phc1 (polyhomeotic homolog 1)
Sus scrofa (pig) : PHC1 (polyhomeotic homolog 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04155,093,947 - 155,118,838 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04222,121,134 - 222,143,635 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44158,736,736 - 158,759,429 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14158,982,409 - 159,004,315 (-)NCBI
Celera4144,331,497 - 144,353,650 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Phc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309203
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.