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Gene: Sall2 (spalt-like transcription factor 2) Rattus norvegicus
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Symbol: Sall2
Name: spalt-like transcription factor 2
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in eye development; neural tube development; and regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated in coloboma. Orthologous to human SALL2 (spalt like transcription factor 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,2',5,5'-tetrachlorobiphenyl; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305854; sal-like 2; sal-like 2 (Drosophila); sal-like protein 2
Orthologs:
Homo sapiens (human) : SALL2 (spalt like transcription factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Sall2 (spalt like transcription factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sall2 (spalt like transcription factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SALL2 (spalt like transcription factor 2)
Canis lupus familiaris (dog) : SALL2 (spalt like transcription factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sall2 (spalt like transcription factor 2)
Sus scrofa (pig) : SALL2 (spalt like transcription factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01528,728,471 - 28,746,042 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01532,538,672 - 32,556,550 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,762,131 - 27,779,639 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11527,779,048 - 27,829,900 (-)NCBI
Celera1525,325,491 - 25,343,094 (-)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sall2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309272
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.