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Gene: Scarf1 (scavenger receptor class F, member 1) Rattus norvegicus
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Symbol: Scarf1
Name: scavenger receptor class F, member 1
Description: Predicted to have low-density lipoprotein particle binding activity and scavenger receptor activity. Predicted to be involved in dendrite development; neuron remodeling; and positive regulation of axon regeneration. Predicted to localize to the integral component of membrane. Orthologous to human SCARF1 (scavenger receptor class F member 1); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; thioacetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: endothelial cells scavenger receptor; LOC303313; scavenger receptor class F member 1
Orthologs:
Homo sapiens (human) : SCARF1 (scavenger receptor class F member 1)  HGNC  Alliance
Mus musculus (house mouse) : Scarf1 (scavenger receptor class F, member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scarf1 (scavenger receptor class F member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCARF1 (scavenger receptor class F member 1)
Canis lupus familiaris (dog) : SCARF1 (scavenger receptor class F member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scarf1 (scavenger receptor class F member 1)
Sus scrofa (pig) : SCARF1 (scavenger receptor class F member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01063,662,967 - 63,683,916 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01064,331,642 - 64,343,951 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41062,835,546 - 62,847,856 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11062,849,164 - 62,860,326 (+)NCBI
Celera1059,387,539 - 59,399,835 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scarf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309330
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.