Gene: Ift20 (intraflagellar transport 20) Rattus norvegicus
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Symbol: Ift20
Name: intraflagellar transport 20
Description: Predicted to have Rab GTPase binding activity and opsin binding activity; involved in protein localization to cilium; predicted to localize to several cellular components, including the actin-based cell projection, cilium, and intracellular organelle; orthologous to human IFT20 (intraflagellar transport 20); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical LOC287541; intraflagellar transport 20 homolog; intraflagellar transport 20 homolog (Chlamydomonas); intraflagellar transport protein 20 homolog; LOC287541; RGD1309400
Orthologs:
Homo sapiens (human) : IFT20 (intraflagellar transport 20)  HGNC  Alliance
Mus musculus (house mouse) : Ift20 (intraflagellar transport 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift20 (intraflagellar transport 20)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT20 (intraflagellar transport 20)
Canis lupus familiaris (dog) : IFT20 (intraflagellar transport 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift20 (intraflagellar transport 20)
Sus scrofa (pig) : IFT20 (intraflagellar transport 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01065,805,808 - 65,811,353 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01065,832,267 - 65,837,794 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,647,046 - 64,652,537 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11064,660,751 - 64,665,876 (+)NCBI
Celera1062,409,186 - 62,414,668 (+)NCBICelera
Cytogenetic Map10q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ift20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309400
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.