Gene: Kdm2a (lysine demethylase 2A) Rattus norvegicus
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Symbol: Kdm2a
Name: lysine demethylase 2A
Description: Predicted to have histone demethylase activity (H3-K36 specific) and unmethylated CpG binding activity; predicted to be involved in several processes, including chordate embryonic development, double-strand break repair via nonhomologous end joining, and positive regulation of macromolecule metabolic process; predicted to localize to the nuclear chromatin; orthologous to human KDM2A (lysine demethylase 2A); PARTICIPATES IN DNA modification pathway; histone modification pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; cyclophosphamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: F-box and leucine-rich repeat protein 11; Fbxl11; LOC361700; lysine (K)-specific demethylase 2A; lysine-specific demethylase 2A
Orthologs:
Homo sapiens (human) : KDM2A (lysine demethylase 2A)  HGNC  Alliance
Mus musculus (house mouse) : Kdm2a (lysine (K)-specific demethylase 2A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm2a (lysine demethylase 2A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM2A (lysine demethylase 2A)
Canis lupus familiaris (dog) : KDM2A (lysine demethylase 2A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm2a (lysine demethylase 2A)
Sus scrofa (pig) : KDM2A (lysine demethylase 2A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,566,130 - 219,642,294 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01226,436,243 - 226,509,594 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,903,426 - 206,972,100 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11207,057,263 - 207,125,981 (-)NCBI
Celera1199,156,169 - 199,224,605 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kdm2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309419
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.