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Gene: Stx16 (syntaxin 16) Rattus norvegicus
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Symbol: Stx16
Name: syntaxin 16
Description: Predicted to have SNAP receptor activity and syntaxin binding activity. Predicted to be involved in several processes, including Golgi ribbon formation; retrograde transport, endosome to Golgi; and vesicle docking. Localizes to the integral component of synaptic vesicle membrane. Predicted to colocalize with the endoplasmic reticulum. Human ortholog(s) of this gene implicated in pseudohypoparathyroidism type IB. Orthologous to several human genes including STX16 (syntaxin 16); INTERACTS WITH (RS)-amphetamine; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362283; similar to Syntaxin-16 (Syn16); syntaxin-16
Orthologs:
Homo sapiens (human) : STX16 (syntaxin 16)  HGNC  Alliance
Mus musculus (house mouse) : Stx16 (syntaxin 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stx16 (syntaxin 16)
Pan paniscus (bonobo/pygmy chimpanzee) : STX16 (syntaxin 16)
Canis lupus familiaris (dog) : STX16 (syntaxin 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stx16 (syntaxin 16)
Sus scrofa (pig) : STX16 (syntaxin 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03172,154,739 - 172,183,699 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03178,206,507 - 178,235,429 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43164,995,189 - 165,022,884 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13164,901,023 - 164,937,604 (+)NCBI
Celera3162,030,293 - 162,057,164 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Stx16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309423
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.