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Gene: Abca4 (ATP binding cassette subfamily A member 4) Rattus norvegicus
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Symbol: Abca4
Name: ATP binding cassette subfamily A member 4
Description: Predicted to have ATPase activity; ATPase-coupled transmembrane transporter activity; and phosphatidylethanolamine flippase activity. Predicted to be involved in phospholipid transport; photoreceptor cell maintenance; and visual perception. Predicted to localize to the intracellular membrane-bounded organelle and photoreceptor outer segment. Human ortholog(s) of this gene implicated in fundus dystrophy and retinal degeneration (multiple). Orthologous to human ABCA4 (ATP binding cassette subfamily A member 4); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; INTERACTS WITH bisphenol A; cobalt dichloride; cocaine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ABCR; ATP-binding cassette, sub-family A (ABC1), member 4; ATP-binding cassette, subfamily A (ABC1), member 4; LOC310836; retinal-specific ATP-binding cassette transporter
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02225,645,539 - 225,783,288 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02243,682,218 - 243,818,930 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42218,712,663 - 218,849,896 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12218,675,724 - 218,812,957 (+)NCBI
Celera2202,594,748 - 202,731,906 (+)NCBICelera
Cytogenetic Map2q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Abca4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309445
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.