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Gene: Ubxn1 (UBX domain protein 1) Rattus norvegicus
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Symbol: Ubxn1
Name: UBX domain protein 1
CRRD ID: 1309471
Description: Predicted to have several functions, including enzyme binding activity; polyubiquitin modification-dependent protein binding activity; and proteasome regulatory particle binding activity. Predicted to be involved in negative regulation of cellular protein metabolic process. Localizes to several cellular components, including dendrite; neuronal cell body; and nucleus. Orthologous to human UBXN1 (UBX domain protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 2B28; LOC293719; MGC124706; RGD1309471; SAPK substrate protein 1; similar to hypothetical protein MGC6696; UBX domain-containing protein 1
Orthologs:
Homo sapiens (human) : UBXN1 (UBX domain protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ubxn1 (UBX domain protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ubxn1 (UBX domain protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : UBXN1 (UBX domain protein 1)
Canis lupus familiaris (dog) : UBXN1 (UBX domain protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ubxn1 (UBX domain protein 1)
Sus scrofa (pig) : UBXN1 (UBX domain protein 1)
Chlorocebus sabaeus (African green monkey) : UBXN1 (UBX domain protein 1)
Heterocephalus glaber (naked mole-rat) : Ubxn1 (UBX domain protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01225,067,953 - 225,071,944 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1225,068,009 - 225,071,945 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01232,005,529 - 232,009,566 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,541,002 - 211,544,682 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1203,278,239 - 203,281,917 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ubxn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309471
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.