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Gene: Alkbh5 (alkB homolog 5, RNA demethylase) Rattus norvegicus
Symbol: Alkbh5
Name: alkB homolog 5, RNA demethylase
Description: Predicted to have 2-oxoglutarate-dependent dioxygenase activity and RNA N6-methyladenosine dioxygenase activity. Predicted to be involved in several processes, including RNA metabolic process; mRNA export from nucleus; and regulation of mRNA stability. Predicted to localize to Golgi apparatus; cytosol; and nuclear speck. Orthologous to human ALKBH5 (alkB homolog 5, RNA demethylase); INTERACTS WITH acetamide; chloroprene; cobalt dichloride.
Type: protein-coding
Also known as: AlkB family member 5, RNA demethylase; alkB, alkylation repair homolog 5; alkB, alkylation repair homolog 5 (E. coli); alkylated DNA repair protein alkB homolog 5; alpha-ketoglutarate-dependent dioxygenase alkB homolog 5; LOC303193; RGD1309496; RNA demethylase ALKBH5; similar to hypothetical protein FLJ20308
Homo sapiens (human) : ALKBH5 (alkB homolog 5, RNA demethylase)  HGNC  Alliance
Mus musculus (house mouse) : Alkbh5 (alkB homolog 5, RNA demethylase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Alkbh5 (alkB homolog 5, RNA demethylase)
Pan paniscus (bonobo/pygmy chimpanzee) : ALKBH5 (alkB homolog 5, RNA demethylase)
Canis lupus familiaris (dog) : ALKBH5 (alkB homolog 5, RNA demethylase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alkbh5 (alkB homolog 5, RNA demethylase)
Sus scrofa (pig) : ALKBH5 (alkB homolog 5, RNA demethylase)
Chlorocebus sabaeus (African green monkey) : ALKBH5 (alkB homolog 5, RNA demethylase)
Heterocephalus glaber (naked mole-rat) : Alkbh5 (alkB homolog 5, RNA demethylase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01046,906,314 - 46,927,759 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,906,115 - 46,930,579 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01046,679,920 - 46,700,727 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41046,811,205 - 46,832,649 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11046,824,567 - 46,845,705 (+)NCBI
Celera1044,601,477 - 44,622,922 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Alkbh5
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309496
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.