Gene: Nsun6 (NOP2/Sun RNA methyltransferase 6) Rattus norvegicus
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Symbol: Nsun6
Name: NOP2/Sun RNA methyltransferase 6
Description: Predicted to have tRNA (cytosine-5-)-methyltransferase activity and tRNA binding activity; predicted to be involved in tRNA methylation; predicted to localize to the cytoplasm; orthologous to human NSUN6 (NOP2/Sun RNA methyltransferase family member 6); INTERACTS WITH 6-propyl-2-thiouracil; thioacetamide; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307148; NOL1/NOP2/Sun domain family, member 6; NOP2/Sun domain family, member 6; NOP2/Sun RNA methyltransferase family member 6; Nopd1; nucleolar protein (NOL1/NOP2/sun) and PUA domains 1; putative methyltransferase NSUN6
Orthologs:
Homo sapiens (human) : NSUN6 (NOP2/Sun RNA methyltransferase 6)  HGNC  Alliance
Mus musculus (house mouse) : Nsun6 (NOL1/NOP2/Sun domain family member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nsun6 (NOP2/Sun RNA methyltransferase 6)
Pan paniscus (bonobo/pygmy chimpanzee) : NSUN6 (NOP2/Sun RNA methyltransferase 6)
Canis lupus familiaris (dog) : NSUN6 (NOP2/Sun RNA methyltransferase 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nsun6 (NOP2/Sun RNA methyltransferase 6)
Sus scrofa (pig) : LOC100524391 (putative methyltransferase NSUN6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01782,020,316 - 82,060,533 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01783,762,303 - 83,802,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41789,082,141 - 89,120,005 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11789,092,973 - 89,133,621 (-)NCBI
Celera1777,243,863 - 77,281,371 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Nsun6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309535
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.