Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Nsun6 (NOP2/Sun RNA methyltransferase 6) Rattus norvegicus
Analyze
Symbol: Nsun6
Name: NOP2/Sun RNA methyltransferase 6
Description: Predicted to have tRNA (cytosine-5-)-methyltransferase activity and tRNA binding activity. Predicted to be involved in tRNA C5-cytosine methylation. Predicted to localize to cytoplasm. Orthologous to human NSUN6 (NOP2/Sun RNA methyltransferase 6); INTERACTS WITH 6-propyl-2-thiouracil; thioacetamide; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307148; NOL1/NOP2/Sun domain family, member 6; NOP2/Sun domain family, member 6; NOP2/Sun RNA methyltransferase family member 6; Nopd1; nucleolar protein (NOL1/NOP2/sun) and PUA domains 1; putative methyltransferase NSUN6
Orthologs:
Homo sapiens (human) : NSUN6 (NOP2/Sun RNA methyltransferase 6)  HGNC  Alliance
Mus musculus (house mouse) : Nsun6 (NOL1/NOP2/Sun domain family member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nsun6 (NOP2/Sun RNA methyltransferase 6)
Pan paniscus (bonobo/pygmy chimpanzee) : NSUN6 (NOP2/Sun RNA methyltransferase 6)
Canis lupus familiaris (dog) : NSUN6 (NOP2/Sun RNA methyltransferase 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nsun6 (NOP2/Sun RNA methyltransferase 6)
Sus scrofa (pig) : LOC100524391 (putative methyltransferase NSUN6)
Chlorocebus sabaeus (African green monkey) : NSUN6 (NOP2/Sun RNA methyltransferase 6)
Heterocephalus glaber (naked mole-rat) : Nsun6 (NOP2/Sun RNA methyltransferase 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01782,020,316 - 82,060,533 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1782,022,490 - 82,060,123 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01783,762,303 - 83,802,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41789,082,141 - 89,120,005 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11789,092,973 - 89,133,621 (-)NCBI
Celera1777,243,863 - 77,281,371 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Nsun6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309535
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.