Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ubiad1 (UbiA prenyltransferase domain containing 1) Rattus norvegicus
Analyze
Symbol: Ubiad1
Name: UbiA prenyltransferase domain containing 1
Description: Predicted to have antioxidant activity and prenyltransferase activity. Predicted to be involved in several processes, including endothelial cell development; quinone biosynthetic process; and vitamin K biosynthetic process. Predicted to localize to the endoplasmic reticulum; integral component of Golgi membrane; and nucleus. Human ortholog(s) of this gene implicated in Schnyder corneal dystrophy. Orthologous to human UBIAD1 (UbiA prenyltransferase domain containing 1); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; caffeine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC313706; RGD1309588; similar to transitional epithelia response protein; ubiA prenyltransferase domain-containing protein 1
Orthologs:
Homo sapiens (human) : UBIAD1 (UbiA prenyltransferase domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Ubiad1 (UbiA prenyltransferase domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ubiad1 (UbiA prenyltransferase domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : UBIAD1 (UbiA prenyltransferase domain containing 1)
Canis lupus familiaris (dog) : UBIAD1 (UbiA prenyltransferase domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ubiad1 (UbiA prenyltransferase domain containing 1)
Sus scrofa (pig) : UBIAD1 (UbiA prenyltransferase domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05165,247,630 - 165,259,228 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05168,904,231 - 168,915,829 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45165,515,219 - 165,526,817 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15165,527,047 - 165,536,759 (-)NCBI
Celera5157,145,271 - 157,156,869 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ubiad1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309588
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.