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Gene: Ptprt (protein tyrosine phosphatase, receptor type, T) Rattus norvegicus
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Symbol: Ptprt
Name: protein tyrosine phosphatase, receptor type, T
Description: Predicted to have several functions, including STAT family protein binding activity; alpha-catenin binding activity; and beta-catenin binding activity. Involved in regulation of synapse organization. Localizes to the glutamatergic synapse and integral component of postsynaptic density membrane. Orthologous to human PTPRT (protein tyrosine phosphatase receptor type T); INTERACTS WITH 1,2-dimethylhydrazine; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362263; LOC680887; LOC680897; receptor-type tyrosine-protein phosphatase T; similar to protein tyrosine phosphatase, receptor type, T
Orthologs:
Homo sapiens (human) : PTPRT (protein tyrosine phosphatase receptor type T)  HGNC  Alliance
Mus musculus (house mouse) : Ptprt (protein tyrosine phosphatase, receptor type, T)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptprt (protein tyrosine phosphatase receptor type T)
Pan paniscus (bonobo/pygmy chimpanzee) : PTPRT (protein tyrosine phosphatase receptor type T)
Canis lupus familiaris (dog) : PTPRT (protein tyrosine phosphatase receptor type T)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptprt (protein tyrosine phosphatase receptor type T)
Sus scrofa (pig) : PTPRT (protein tyrosine phosphatase receptor type T)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03157,537,192 - 158,328,984 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03163,757,891 - 164,563,677 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43152,380,772 - 153,172,076 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13152,154,289 - 153,093,067 (-)NCBI
Celera3148,867,063 - 149,656,746 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ptprt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309653
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.