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Gene: Sf3b4 (splicing factor 3b, subunit 4) Rattus norvegicus
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Symbol: Sf3b4
Name: splicing factor 3b, subunit 4
Description: Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and positive regulation of mRNA splicing, via spliceosome. Predicted to localize to the U12-type spliceosomal complex; U2-type precatalytic spliceosome; and nucleolus. Human ortholog(s) of this gene implicated in Nager acrofacial dysostosis. Orthologous to human SF3B4 (splicing factor 3b subunit 4); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295270; splicing factor 3B subunit 4
Orthologs:
Homo sapiens (human) : SF3B4 (splicing factor 3b subunit 4)  HGNC  Alliance
Mus musculus (house mouse) : Sf3b4 (splicing factor 3b, subunit 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sf3b4 (splicing factor 3b subunit 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SF3B4 (splicing factor 3b subunit 4)
Canis lupus familiaris (dog) : SF3B4 (splicing factor 3b subunit 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sf3b4 (splicing factor 3b subunit 4)
Sus scrofa (pig) : SF3B4 (splicing factor 3b subunit 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02198,312,428 - 198,317,180 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02217,799,411 - 217,804,163 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,976,681 - 190,981,433 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12190,939,434 - 190,944,187 (+)NCBI
Celera2176,260,078 - 176,264,830 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sf3b4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309667
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.