Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Colec11 (collectin sub-family member 11) Rattus norvegicus
Symbol: Colec11
Name: collectin sub-family member 11
Description: Predicted to have several functions, including calcium ion binding activity; calcium-dependent carbohydrate binding activity; and monosaccharide binding activity. Predicted to be involved in antimicrobial humoral response; complement activation, lectin pathway; and developmental process. Predicted to localize to the extracellular space. Human ortholog(s) of this gene implicated in 3MC syndrome 2. Orthologous to human COLEC11 (collectin subfamily member 11); PARTICIPATES IN phagocytosis pathway; INTERACTS WITH 2-methylcholine (ortholog); 3-isobutyl-1-methyl-7H-xanthine (ortholog); 4,4'-sulfonyldiphenol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: collectin-11; LOC366588
Homo sapiens (human) : COLEC11 (collectin subfamily member 11)  HGNC  Alliance
Mus musculus (house mouse) : Colec11 (collectin sub-family member 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Colec11 (collectin subfamily member 11)
Pan paniscus (bonobo/pygmy chimpanzee) : COLEC11 (collectin subfamily member 11)
Canis lupus familiaris (dog) : COLEC11 (collectin subfamily member 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Colec11 (collectin subfamily member 11)
Sus scrofa (pig) : COLEC11 (collectin subfamily member 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0647,857,767 - 47,889,961 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0656,559,693 - 56,591,992 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4646,466,449 - 46,504,760 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1646,469,581 - 46,507,886 (-)NCBI
Celera644,448,098 - 44,479,912 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Colec11
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309678
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.