Gene: Vps36 (vacuolar protein sorting 36 homolog) Rattus norvegicus
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Symbol: Vps36
Name: vacuolar protein sorting 36 homolog
Description: Predicted to have protein C-terminus binding activity and ubiquitin binding activity; predicted to be involved in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; predicted to localize to the cytoplasm and intracellular organelle; orthologous to human VPS36 (vacuolar protein sorting 36 homolog); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ELL-associated protein of 45 kDa; ESCRT-II complex subunit VPS36; LOC290851; RGD1309754; similar to RIKEN cDNA 2210415M20; vacuolar protein sorting 36; vacuolar protein sorting 36 (yeast); vacuolar protein sorting 36 homolog (S. cerevisiae); vacuolar protein-sorting-associated protein 36
Orthologs:
Homo sapiens (human) : VPS36 (vacuolar protein sorting 36 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Vps36 (vacuolar protein sorting 36)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps36 (vacuolar protein sorting 36 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS36 (vacuolar protein sorting 36 homolog)
Canis lupus familiaris (dog) : VPS36 (vacuolar protein sorting 36 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps36 (vacuolar protein sorting 36 homolog)
Sus scrofa (pig) : VPS36 (vacuolar protein sorting 36 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01674,719,642 - 74,743,921 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01674,355,181 - 74,378,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41674,462,427 - 74,486,889 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11674,462,685 - 74,487,153 (-)NCBI
Celera1667,699,712 - 67,723,982 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps36
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309754
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.