Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Snx4 (sorting nexin 4) Rattus norvegicus
Analyze
Symbol: Snx4
Name: sorting nexin 4
Description: Predicted to have phosphatidylinositol binding activity and signaling receptor binding activity. Predicted to be involved in endocytic recycling; positive regulation of histamine secretion by mast cell; and protein transport. Predicted to localize to the cytoplasm; cytoplasmic dynein complex; and plasma membrane. Orthologous to human SNX4 (sorting nexin 4); INTERACTS WITH 3H-1,2-dithiole-3-thione; alpha-hexachlorocyclohexane; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360725; sorting nexin-4
Orthologs:
Homo sapiens (human) : SNX4 (sorting nexin 4)  HGNC  Alliance
Mus musculus (house mouse) : Snx4 (sorting nexin 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx4 (sorting nexin 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX4 (sorting nexin 4)
Canis lupus familiaris (dog) : SNX4 (sorting nexin 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx4 (sorting nexin 4)
Sus scrofa (pig) : SNX4 (sorting nexin 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01170,693,381 - 70,753,620 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01173,779,997 - 73,836,594 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41169,283,047 - 69,340,448 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11169,340,633 - 69,398,051 (-)NCBI
Celera1166,908,596 - 66,965,885 (-)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snx4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309763
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.