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Gene: Snx13 (sorting nexin 13) Rattus norvegicus
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Symbol: Snx13
Name: sorting nexin 13
Description: Predicted to have phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in intracellular protein transport and positive regulation of GTPase activity. Predicted to localize to the early endosome. Orthologous to human SNX13 (sorting nexin 13); PARTICIPATES IN epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphas family; INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362731; sorting nexin-13
Orthologs:
Homo sapiens (human) : SNX13 (sorting nexin 13)  HGNC  Alliance
Mus musculus (house mouse) : Snx13 (sorting nexin 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx13 (sorting nexin 13)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX13 (sorting nexin 13)
Canis lupus familiaris (dog) : SNX13 (sorting nexin 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx13 (sorting nexin 13)
Sus scrofa (pig) : SNX13 (sorting nexin 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0654,487,626 - 54,591,716 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0664,111,167 - 64,215,827 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4653,727,055 - 53,827,207 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1653,729,850 - 53,831,298 (+)NCBI
Celera650,916,785 - 51,016,544 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Snx13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309778
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.