Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Bcl11a (BAF chromatin remodeling complex subunit BCL11A) Rattus norvegicus
Analyze
Symbol: Bcl11a
Name: BAF chromatin remodeling complex subunit BCL11A
Description: Exhibits protein kinase binding activity. Involved in cellular response to L-glutamate; negative regulation of nervous system development; and positive regulation of gene expression. Localizes to cytoplasm; nucleus; and postsynaptic density. Human ortholog(s) of this gene implicated in autism spectrum disorder; beta thalassemia; schizophrenia; and sickle cell anemia. Orthologous to human BCL11A (BAF chromatin remodeling complex subunit BCL11A); INTERACTS WITH 1,3-dinitrobenzene; 2-methoxyethanol; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B-cell CLL/lymphoma 11A; B-cell CLL/lymphoma 11A (zinc finger protein); B-cell lymphoma/leukemia 11A; BCL11A, BAF complex component; LOC305589
Orthologs:
Homo sapiens (human) : BCL11A (BAF chromatin remodeling complex subunit BCL11A)  HGNC  Alliance
Mus musculus (house mouse) : Bcl11a (B cell CLL/lymphoma 11A (zinc finger protein))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Bcl11a (BAF chromatin remodeling complex subunit BCL11A)
Pan paniscus (bonobo/pygmy chimpanzee) : BCL11A (BAF chromatin remodeling complex subunit BCL11A)
Canis lupus familiaris (dog) : BCL11A (BAF chromatin remodeling complex subunit BCL11A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bcl11a (BAF chromatin remodeling complex subunit BCL11A)
Sus scrofa (pig) : BCL11A (BAF chromatin remodeling complex subunit BCL11A)
Chlorocebus sabaeus (African green monkey) : BCL11A (BAF chromatin remodeling complex subunit BCL11A)
Heterocephalus glaber (naked mole-rat) : Bcl11a (BAF chromatin remodeling complex subunit BCL11A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.014108,826,717 - 108,921,197 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14108,826,831 - 108,921,669 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014108,546,630 - 108,641,101 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414105,002,744 - 105,088,365 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114105,021,975 - 105,116,487 (+)NCBI
Celera1496,996,223 - 97,081,419 (+)NCBICelera
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Bcl11a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309923
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.