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Gene: Pogz (pogo transposable element derived with ZNF domain) Rattus norvegicus
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Symbol: Pogz
Name: pogo transposable element derived with ZNF domain
Description: Predicted to have DNA binding activity. Predicted to be involved in kinetochore assembly and mitotic sister chromatid cohesion. Predicted to localize to cytosol; nuclear chromatin; and nucleoplasm. Human ortholog(s) of this gene implicated in White-Sutton syndrome. Orthologous to human POGZ (pogo transposable element derived with ZNF domain); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; chloroprene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC102546890; LOC310658; pogo transposable element with ZNF domain; pogo transposable element with ZNF domain-like
Orthologs:
Homo sapiens (human) : POGZ (pogo transposable element derived with ZNF domain)  HGNC  Alliance
Mus musculus (house mouse) : Pogz (pogo transposable element with ZNF domain)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pogz (pogo transposable element derived with ZNF domain)
Pan paniscus (bonobo/pygmy chimpanzee) : POGZ (pogo transposable element derived with ZNF domain)
Canis lupus familiaris (dog) : POGZ (pogo transposable element derived with ZNF domain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pogz (pogo transposable element derived with ZNF domain)
Sus scrofa (pig) : POGZ (pogo transposable element derived with ZNF domain)
Chlorocebus sabaeus (African green monkey) : POGZ (pogo transposable element derived with ZNF domain)
Heterocephalus glaber (naked mole-rat) : Pogz (pogo transposable element derived with ZNF domain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02195,995,322 - 196,041,500 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2195,996,521 - 196,041,497 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02215,507,126 - 215,534,827 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42189,748,657 - 189,776,355 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12189,685,298 - 189,728,992 (+)NCBI
Celera2174,957,108 - 174,984,012 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pogz
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1309980
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.