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Gene: Dph6 (diphthamine biosynthesis 6) Rattus norvegicus
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Symbol: Dph6
Name: diphthamine biosynthesis 6
Description: Predicted to have diphthine-ammonia ligase activity. Predicted to be involved in peptidyl-diphthamide biosynthetic process from peptidyl-histidine. Predicted to localize to nucleolus and nucleoplasm. Orthologous to human DPH6 (diphthamine biosynthesis 6); INTERACTS WITH bisphenol A; flutamide; Soman.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP binding domain 4; ATP-binding domain-containing protein 4; Atpbd4; diphthamide synthase; diphthamide synthetase; diphthine--ammonia ligase; LOC362191; protein DPH6 homolog; RGD1310006; similar to RIKEN cDNA 5730421E18
Orthologs:
Homo sapiens (human) : DPH6 (diphthamine biosynthesis 6)  HGNC  Alliance
Mus musculus (house mouse) : Dph6 (diphthamine biosynthesis 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Dph6 (diphthamine biosynthesis 6)
Pan paniscus (bonobo/pygmy chimpanzee) : DPH6 (diphthamine biosynthesis 6)
Canis lupus familiaris (dog) : DPH6 (diphthamine biosynthesis 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Dph6 (diphthamine biosynthesis 6)
Sus scrofa (pig) : DPH6 (diphthamine biosynthesis 6)
Chlorocebus sabaeus (African green monkey) : DPH6 (diphthamine biosynthesis 6)
Heterocephalus glaber (naked mole-rat) : Dph6 (diphthamine biosynthesis 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03106,007,721 - 106,136,662 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3106,009,356 - 106,136,615 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03112,579,626 - 112,708,200 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43100,397,745 - 100,536,300 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13100,294,173 - 100,432,728 (-)NCBI
Celera3100,276,488 - 100,405,912 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Dph6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310006
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.