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Gene: Hpdl (4-hydroxyphenylpyruvate dioxygenase-like) Rattus norvegicus
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Symbol: Hpdl
Name: 4-hydroxyphenylpyruvate dioxygenase-like
Description: Predicted to have 4-hydroxyphenylpyruvate dioxygenase activity and metal ion binding activity. Predicted to be involved in aromatic amino acid family metabolic process and oxidation-reduction process. Orthologous to human HPDL (4-hydroxyphenylpyruvate dioxygenase like); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 4-hydroxyphenylpyruvate dioxygenase-like protein; Gloxd1; glyoxalase domain containing 1; glyoxalase domain-containing protein 1; LOC313521; RGD1310014; similar to RIKEN cDNA A830048M07
Orthologs:
Homo sapiens (human) : HPDL (4-hydroxyphenylpyruvate dioxygenase like)  HGNC  Alliance
Mus musculus (house mouse) : Hpdl (4-hydroxyphenylpyruvate dioxygenase-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hpdl (4-hydroxyphenylpyruvate dioxygenase like)
Pan paniscus (bonobo/pygmy chimpanzee) : HPDL (4-hydroxyphenylpyruvate dioxygenase like)
Canis lupus familiaris (dog) : HPDL (4-hydroxyphenylpyruvate dioxygenase like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hpdl (4-hydroxyphenylpyruvate dioxygenase like)
Sus scrofa (pig) : HPDL (4-hydroxyphenylpyruvate dioxygenase like)
Chlorocebus sabaeus (African green monkey) : HPDL (4-hydroxyphenylpyruvate dioxygenase like)
Heterocephalus glaber (naked mole-rat) : Hpdl (4-hydroxyphenylpyruvate dioxygenase like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05135,675,826 - 135,677,432 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5135,675,832 - 135,677,432 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,471,945 - 139,473,551 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,116,378 - 137,117,984 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15137,121,605 - 137,123,210 (-)NCBI
Celera5128,813,296 - 128,814,902 (-)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hpdl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310014
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.