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Gene: Gsx1 (GS homeobox 1) Rattus norvegicus
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Symbol: Gsx1
Name: GS homeobox 1
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in nervous system development and positive regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Orthologous to human GSX1 (GS homeobox 1); INTERACTS WITH C60 fullerene; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 5-aza-2'-deoxycytidine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: genomic screened homeo box 1; Gsh1; LOC288457
Orthologs:
Homo sapiens (human) : GSX1 (GS homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Gsx1 (GS homeobox 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gsx1 (GS homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GSX1 (GS homeobox 1)
Canis lupus familiaris (dog) : GSX1 (GS homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gsx1 (GS homeobox 1)
Sus scrofa (pig) : GSX1 (GS homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0129,605,873 - 9,607,168 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl129,605,873 - 9,607,168 (-)Ensembl
Rnor_5.01211,718,789 - 11,720,084 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4128,551,150 - 8,552,445 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1128,580,825 - 8,583,114 (+)NCBI
Celera129,709,969 - 9,711,264 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gsx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310020
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.