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Gene: Cstf2t (cleavage stimulation factor subunit 2, tau variant) Rattus norvegicus
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Symbol: Cstf2t
Name: cleavage stimulation factor subunit 2, tau variant
Description: Predicted to have mRNA binding activity. Predicted to be involved in pre-mRNA cleavage required for polyadenylation. Predicted to localize to the mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CSTF2T (cleavage stimulation factor subunit 2 tau variant); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 1,3-dinitrobenzene; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cleavage stimulation factor subunit 2 tau; cleavage stimulation factor subunit 2 tau variant; cleavage stimulation factor, 3' pre-RNA subunit 2, tau; cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau; cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant; cleavage stimulation factor, 3' pre-RNA, subunit 2, tau; cleavage stimulation factor, 3' pre-RNA, subunit 2, tau variant; LOC309338
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01249,574,954 - 249,578,520 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01256,813,751 - 256,817,317 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,060,489 - 235,064,055 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11235,224,192 - 235,226,470 (+)NCBI
Celera1226,077,478 - 226,081,044 (+)NCBICelera
Cytogenetic Map1q52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cstf2t
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310026
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.