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Gene: Ahdc1 (AT hook, DNA binding motif, containing 1) Rattus norvegicus
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Symbol: Ahdc1
Name: AT hook, DNA binding motif, containing 1
Description: Human ortholog(s) of this gene implicated in Xia-Gibbs Syndrome. Orthologous to human AHDC1 (AT-hook DNA binding motif containing 1); INTERACTS WITH 1,2-dimethylhydrazine; 2,6-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: A.T hook DNA-binding motif-containing protein 1; AT-hook DNA-binding motif-containing protein 1; LOC362617; RGD1310031; similar to hypothetical protein MGC29331
Orthologs:
Homo sapiens (human) : AHDC1 (AT-hook DNA binding motif containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Ahdc1 (AT hook, DNA binding motif, containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ahdc1 (AT-hook DNA binding motif containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AHDC1 (AT-hook DNA binding motif containing 1)
Canis lupus familiaris (dog) : AHDC1 (AT-hook DNA binding motif containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ahdc1 (AT-hook DNA binding motif containing 1)
Sus scrofa (pig) : AHDC1 (AT-hook DNA binding motif containing 1)
Chlorocebus sabaeus (African green monkey) : AHDC1 (AT-hook DNA binding motif containing 1)
Heterocephalus glaber (naked mole-rat) : Ahdc1 (AT-hook DNA binding motif containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05151,209,894 - 151,277,192 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5151,211,342 - 151,277,165 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05154,878,231 - 154,944,337 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45152,034,725 - 152,101,966 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15152,045,178 - 152,060,307 (-)NCBI
Celera5143,693,243 - 143,715,931 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ahdc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310031
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.