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Gene: Spata6l (spermatogenesis associated 6-like) Rattus norvegicus
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Symbol: Spata6l
Name: spermatogenesis associated 6-like
Description: Predicted to have myosin light chain binding activity. Predicted to be involved in spermatogenesis. Predicted to localize to sperm connecting piece. Orthologous to human SPATA6L (spermatogenesis associated 6 like); INTERACTS WITH bisphenol A; C60 fullerene; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC361747; LOC361747; RGD1310039; similar to hypothetical protein FLJ10058; spermatogenesis associated 6-like protein; uncharacterized protein C9orf68 homolog
Orthologs:
Homo sapiens (human) : SPATA6L (spermatogenesis associated 6 like)  HGNC  Alliance
Mus musculus (house mouse) : 4430402I18Rik (RIKEN cDNA 4430402I18 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata6l (spermatogenesis associated 6 like)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA6L (spermatogenesis associated 6 like)
Canis lupus familiaris (dog) : SPATA6L (spermatogenesis associated 6 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata6l (spermatogenesis associated 6 like)
Sus scrofa (pig) : SPATA6L (spermatogenesis associated 6 like)
Chlorocebus sabaeus (African green monkey) : SPATA6L (spermatogenesis associated 6 like)
Heterocephalus glaber (naked mole-rat) : Spata6l (spermatogenesis associated 6 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01247,037,004 - 247,088,124 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,046,650 - 247,088,012 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01254,286,409 - 254,327,826 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41232,561,074 - 232,602,405 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11232,725,097 - 232,766,428 (-)NCBI
Celera1223,794,385 - 223,835,716 (-)NCBICelera
Cytogenetic Map1q52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata6l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310039
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.