Gene: Chd2 (chromodomain helicase DNA binding protein 2) Rattus norvegicus
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Symbol: Chd2
Name: chromodomain helicase DNA binding protein 2
Description: Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity and histone binding activity. Predicted to be involved in cellular response to DNA damage stimulus; hematopoietic stem cell differentiation; and muscle organ development. Predicted to localize to the nucleolus and nucleoplasm. Human ortholog(s) of this gene implicated in childhood onset epileptic encephalopathy. Orthologous to human CHD2 (chromodomain helicase DNA binding protein 2); INTERACTS WITH 4-amino-2,6-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromodomain-helicase-DNA-binding protein 2; LOC308738
Orthologs:
Homo sapiens (human) : CHD2 (chromodomain helicase DNA binding protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Chd2 (chromodomain helicase DNA binding protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chd2 (chromodomain helicase DNA binding protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CHD2 (chromodomain helicase DNA binding protein 2)
Canis lupus familiaris (dog) : CHD2 (chromodomain helicase DNA binding protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chd2 (chromodomain helicase DNA binding protein 2)
Sus scrofa (pig) : CHD2 (chromodomain helicase DNA binding protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01134,757,934 - 134,873,053 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01135,782,462 - 135,897,354 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41128,609,727 - 128,720,325 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11128,688,083 - 128,798,804 (-)NCBI
Celera1119,322,047 - 119,431,932 (-)NCBICelera
Cytogenetic Map1q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310056
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.