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Gene: Iqcb1 (IQ motif containing B1) Rattus norvegicus
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Symbol: Iqcb1
Name: IQ motif containing B1
Description: Predicted to have calmodulin binding activity and enzyme binding activity. Predicted to be involved in cilium assembly; maintenance of animal organ identity; and photoreceptor cell maintenance. Predicted to localize to several cellular components, including intercellular bridge; microtubule cytoskeleton; and photoreceptor cell cilium. Human ortholog(s) of this gene implicated in Leber congenital amaurosis; Senior-Loken syndrome; nephronophthisis; and retinitis pigmentosa 3. Orthologous to human IQCB1 (IQ motif containing B1); INTERACTS WITH acetamide; bisphenol A; 17beta-hydroxy-5alpha-androstan-3-one (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: IQ calmodulin-binding motif containing 1; IQ calmodulin-binding motif-containing protein 1; LOC303915; nephrocystin 5; NPHP5
Orthologs:
Homo sapiens (human) : IQCB1 (IQ motif containing B1)  HGNC  Alliance
Mus musculus (house mouse) : Iqcb1 (IQ calmodulin-binding motif containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Iqcb1 (IQ motif containing B1)
Pan paniscus (bonobo/pygmy chimpanzee) : IQCB1 (IQ motif containing B1)
Canis lupus familiaris (dog) : IQCB1 (IQ motif containing B1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Iqcb1 (IQ motif containing B1)
Sus scrofa (pig) : IQCB1 (IQ motif containing B1)
Chlorocebus sabaeus (African green monkey) : IQCB1 (IQ motif containing B1)
Heterocephalus glaber (naked mole-rat) : Iqcb1 (IQ motif containing B1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01166,824,059 - 66,878,585 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1166,824,065 - 66,878,551 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01169,914,664 - 69,969,813 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41165,708,818 - 65,763,303 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11165,766,406 - 65,820,891 (-)NCBI
Celera1163,378,195 - 63,432,314 (-)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Iqcb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310069
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.