Gene: Snf8 (SNF8 subunit of ESCRT-II) Rattus norvegicus
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Symbol: Snf8
Name: SNF8 subunit of ESCRT-II
Description: Predicted to have several functions, including channel regulator activity, protein C-terminus binding activity, and protein N-terminus binding activity; predicted to be involved in several processes, including early endosome to late endosome transport, endosomal transport, and positive regulation of macromolecule metabolic process; predicted to localize to several cellular components, including the cytoplasm, intracellular organelle, and plasma membrane; orthologous to human SNF8 (SNF8 subunit of ESCRT-II); PARTICIPATES IN autophagy pathway; endocytosis pathway; INTERACTS WITH 2,4,6-trinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: D11moh34; EAP30 subunit of ELL complex; ELL-associated protein of 30 kDa; ESCRT-II complex subunit VPS22; LOC287645; MGC105799; RGD1310144; similar to EAP30 subunit of ELL complex; SNF8, ESCRT-II complex subunit; SNF8, ESCRT-II complex subunit, homolog; SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae); vacuolar-sorting protein SNF8
Orthologs:
Homo sapiens (human) : SNF8 (SNF8 subunit of ESCRT-II)  HGNC  Alliance
Mus musculus (house mouse) : Snf8 (SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snf8 (SNF8 subunit of ESCRT-II)
Pan paniscus (bonobo/pygmy chimpanzee) : SNF8 (SNF8 subunit of ESCRT-II)
Canis lupus familiaris (dog) : SNF8 (SNF8, ESCRT-II complex subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snf8 (SNF8 subunit of ESCRT-II)
Sus scrofa (pig) : SNF8 (SNF8 subunit of ESCRT-II)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01083,856,331 - 83,868,621 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01083,661,434 - 83,673,490 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41084,749,033 - 84,761,230 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11084,763,402 - 84,775,600 (+)NCBI
Celera1079,752,499 - 79,764,696 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snf8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310144
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.