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Gene: Cpne3 (copine 3) Rattus norvegicus
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Symbol: Cpne3
Name: copine 3
Description: Predicted to have several functions, including calcium-dependent phospholipid binding activity; calcium-dependent protein binding activity; and receptor tyrosine kinase binding activity. Predicted to be involved in several processes, including ERBB2 signaling pathway; cellular response to calcium ion; and positive regulation of cell migration. Predicted to localize to several cellular components, including the focal adhesion; mitochondrion; and nuclear lumen. Orthologous to human CPNE3 (copine 3); INTERACTS WITH 2,6-dinitrotoluene; 3-chloropropane-1,2-diol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: copine III; copine-3; LOC313087
Orthologs:
Homo sapiens (human) : CPNE3 (copine 3)  HGNC  Alliance
Mus musculus (house mouse) : Cpne3 (copine III)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cpne3 (copine 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CPNE3 (copine 3)
Canis lupus familiaris (dog) : CPNE3 (copine 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cpne3 (copine 3)
Sus scrofa (pig) : CPNE3 (copine 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0533,525,307 - 33,574,610 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,528,154 - 33,574,596 (-)Ensembl
Rnor_5.0538,179,711 - 38,229,012 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4534,154,672 - 34,203,959 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1534,157,039 - 34,189,593 (-)NCBI
Celera532,108,679 - 32,139,506 (-)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cpne3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310178
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.