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Gene: Snx5 (sorting nexin 5) Rattus norvegicus
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Symbol: Snx5
Name: sorting nexin 5
Description: Exhibits D1 dopamine receptor binding activity and phosphatidylinositol phosphate binding activity. Involved in epidermal growth factor catabolic process; negative regulation of blood pressure; and positive regulation of renal sodium excretion. Localizes to the brush border; cytoplasm; and plasma membrane. Predicted to colocalize with the early endosome membrane. Orthologous to human SNX5 (sorting nexin 5); PARTICIPATES IN retromer-mediated pathway; INTERACTS WITH bisphenol A; cobalt dichloride; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296199; sorting nexin-5
Orthologs:
Homo sapiens (human) : SNX5 (sorting nexin 5)  HGNC  Alliance
Mus musculus (house mouse) : Snx5 (sorting nexin 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx5 (sorting nexin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX5 (sorting nexin 5)
Canis lupus familiaris (dog) : SNX5 (sorting nexin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx5 (sorting nexin 5)
Sus scrofa (pig) : SNX5 (sorting nexin 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03138,378,032 - 138,397,944 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03144,812,043 - 144,831,955 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43132,778,470 - 132,797,964 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13132,684,643 - 132,703,178 (-)NCBI
Celera3130,517,371 - 130,536,866 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snx5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310190
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.