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Gene: Kdm2b (lysine demethylase 2B) Rattus norvegicus
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Symbol: Kdm2b
Name: lysine demethylase 2B
Description: Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including brain development; cellular protein modification process; and embryonic morphogenesis. Predicted to colocalize with the PcG protein complex. Orthologous to human KDM2B (lysine demethylase 2B); PARTICIPATES IN DNA modification pathway; histone modification pathway; INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: F-box and leucine-rich repeat protein 10; Fbxl10; LOC304495; lysine (K)-specific demethylase 2B; lysine-specific demethylase 2B
Orthologs:
Homo sapiens (human) : KDM2B (lysine demethylase 2B)  HGNC  Alliance
Mus musculus (house mouse) : Kdm2b (lysine (K)-specific demethylase 2B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm2b (lysine demethylase 2B)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM2B (lysine demethylase 2B)
Canis lupus familiaris (dog) : KDM2B (lysine demethylase 2B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm2b (lysine demethylase 2B)
Sus scrofa (pig) : KDM2B (lysine demethylase 2B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01239,021,924 - 39,161,954 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01240,918,049 - 41,054,953 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41234,672,334 - 34,802,802 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11234,528,594 - 34,666,191 (+)NCBI
Celera1235,254,131 - 35,380,144 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kdm2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310217
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.